Reference

Running the Zalpha functions Use this function to run all the statistics automatically
Zalpha_all()	Runs all the statistics in the zalpha package
Create an LD profile Use this function to create an LD profile. An LD profile is required if you want to adjust for expected LD.
create_LDprofile()	Creates an LD profile
Zalpha functions These are all the Zalpha functions.
Zalpha()	Runs the Zalpha function
Zalpha_expected()	Runs the Zalpha function on the expected r-squared values for the region
Zalpha_rsq_over_expected()	Runs the Zalpha function on the r-squared values over the expected r-squared values for the region
Zalpha_log_rsq_over_expected()	Runs the Zalpha function on the log of the r-squared values over the expected r-squared values for the region
Zalpha_Zscore()	Runs the Zalpha function using the Z score of the r-squared values for the region
Zalpha_BetaCDF()	Runs the Zalpha function using a cumulative beta distribution function on the r-squared values for the region
Zbeta functions These are all the Zbeta functions.
Zbeta()	Runs the Zbeta function
Zbeta_expected()	Runs the Zbeta function on the expected r-squared values for the region
Zbeta_rsq_over_expected()	Runs the Zbeta function on the r-squared values over the expected r-squared values for the region
Zbeta_log_rsq_over_expected()	Runs the Zbeta function on the log of the r-squared values over the expected r-squared values for the region
Zbeta_Zscore()	Runs the Zbeta function using the Z score of the r-squared values for the region
Zbeta_BetaCDF()	Runs the Zbeta function using a cumulative beta distribution function on the r-squared values for the region
Diversity functions These are the diversity functions.
LR()	Runs the LR function
L_plus_R()	Runs the L_plus_R function
Example datasets Two example datasets that come with the package.
snps	Dataset containing details on simulated SNPs
LDprofile	Dataset containing an example LD profile