Dataset containing details on simulated SNPs

A dataset containing the positions, genetic distances and alleles for 20 SNPs, across 10 simulated chromosomes.

snps

Format

A data frame with 20 rows and 12 variables:

bp_positions

location of the SNP on the chromosome e.g. in base pairs

cM_distances

genetic distance of the SNP from the start of the chromosome e.g. in centimorgans

chrom_1

allele of the SNP on the first example chromosome

chrom_2

allele of the SNP on the second example chromosome

chrom_3

allele of the SNP on the third example chromosome

chrom_4

allele of the SNP on the fourth example chromosome

chrom_5

allele of the SNP on the fifth example chromosome

chrom_6

allele of the SNP on the sixth example chromosome

chrom_7

allele of the SNP on the seventh example chromosome

chrom_8

allele of the SNP on the eighth example chromosome

chrom_9

allele of the SNP on the ninth example chromosome

chrom_10

allele of the SNP on the tenth example chromosome

Examples

snps
#>    bp_positions cM_distances chrom_1 chrom_2 chrom_3 chrom_4 chrom_5 chrom_6
#> 1           100       0.0001       1       0       0       1       1       1
#> 2           200       0.0002       1       1       1       0       0       0
#> 3           300       0.0005       1       1       1       1       1       1
#> 4           400       0.0008       0       0       1       1       1       0
#> 5           500       0.0010       1       1       1       1       0       1
#> 6           600       0.0015       1       0       0       1       1       0
#> 7           700       0.0017       1       0       0       1       1       1
#> 8           800       0.0019       0       0       0       0       1       1
#> 9           900       0.0023       1       1       0       0       1       1
#> 10         1000       0.0024       0       0       1       1       0       0
#> 11         1100       0.0026       1       0       1       0       0       0
#> 12         1200       0.0027       1       0       1       0       1       0
#> 13         1300       0.0032       1       1       1       1       0       0
#> 14         1400       0.0037       1       0       1       0       1       0
#> 15         1500       0.0039       0       0       1       0       1       0
#> 16         1600       0.0040       1       0       0       0       0       1
#> 17         1700       0.0041       0       0       0       1       0       1
#> 18         1800       0.0045       1       0       1       0       0       0
#> 19         1900       0.0048       1       0       0       1       1       1
#> 20         2000       0.0049       0       1       1       0       0       1
#>    chrom_7 chrom_8 chrom_9 chrom_10
#> 1        0       0       0        0
#> 2        1       0       1        0
#> 3        1       1       0        1
#> 4        1       1       0        0
#> 5        0       0       1        0
#> 6        1       0       0        1
#> 7        1       1       1        0
#> 8        1       1       0        1
#> 9        0       0       1        1
#> 10       1       1       1        1
#> 11       0       0       1        0
#> 12       0       1       1        1
#> 13       1       1       1        0
#> 14       0       1       0        1
#> 15       0       1       1        0
#> 16       1       1       0        1
#> 17       1       1       0        1
#> 18       1       1       1        0
#> 19       0       0       0        1
#> 20       1       0       0        1